Index of /shipunov/school/biol_240/en/supp/ripeline

	Name	Last modified	Size	Description
	Parent Directory		-
	03_checks.r	2023-11-03 15:22	733
	03_checks_rresults.txt	2023-11-03 15:22	725
	04_duplicated_ids_check.r	2023-11-03 15:22	495
	04_duplicated_ids_check_rresults.txt	2023-11-03 15:22	533
	13_make_wanted.r	2023-11-03 15:22	1.1K
	13_make_wanted_rresults.txt	2023-11-03 15:22	1.2K
	13_wanted/	2023-11-03 15:22	-
	20_make_sets.r	2023-11-03 15:22	1.5K
	20_make_sets_rresults.txt	2023-11-03 15:22	1.6K
	20_sets/	2023-11-03 15:22	-
	30_align.r	2023-11-03 15:22	678
	30_align_rresults.txt	2023-11-03 15:22	7.7K
	30_alignments/	2023-11-03 15:22	-
	31_alignments_trimmed/	2023-11-03 15:22	-
	31_trim.r	2023-11-03 15:22	945
	31_trim_rresults.txt	2023-11-03 15:22	1.0K
	32_alignments_trimmed_gapcoded/	2023-11-03 15:22	-
	32_gapcode.r	2023-11-03 15:22	704
	32_gapcode_rresults.txt	2023-11-03 15:22	808
	40_concatenate_and_stat.r	2023-11-03 15:22	9.4K
	40_concatenate_and_stat_rresults.txt	2023-11-03 15:22	11K
	40_concatenated/	2023-11-03 15:22	-
	50_technical_trees/	2023-11-03 15:22	-
	51_make_r_raw_kmer_trees.r	2023-11-03 15:22	2.2K
	51_make_r_raw_kmer_trees_rresults.txt	2023-11-03 15:22	2.4K
	52_make_r_semistrict_kmer_tree.r	2023-11-03 15:22	1.2K
	52_make_r_semistrict_kmer_tree_rresults.txt	2023-11-03 15:22	1.4K
	53_make_r_nj_single_marker_trees.r	2023-11-03 15:22	1.2K
	53_make_r_nj_single_marker_trees_rresults.txt	2023-11-03 15:22	1.2K
	61_make_r_mp_semistrict_tree.r	2023-11-03 15:22	2.6K
	61_make_r_mp_semistrict_tree_rresults.txt	2023-11-03 15:22	70K
	70_raxml_working/	2023-11-03 15:22	-
	71_make_r_ml_modeltest.r	2023-11-03 15:22	1.0K
	71_make_r_ml_modeltest_rresults.txt	2023-11-03 15:22	2.1K
	72_make_r_ml_trees.r	2023-11-03 15:22	1.8K
	72_make_r_ml_trees_rresults.txt	2023-11-03 15:22	51K
	73_make_raxml_trees.r	2023-11-03 15:22	1.9K
	73_make_raxml_trees_rresults.txt	2023-11-03 15:22	16K
	80_mrbayes_working/	2023-11-03 15:22	-
	81_make_mrbayes_semistrict_tree.r	2023-11-03 15:22	2.0K
	81_make_mrbayes_semistrict_tree_rresults.txt	2023-11-03 15:22	50K
	99_trees/	2023-11-03 15:22	-
	README	2023-11-03 15:22	2.9K
	README_files	2023-11-03 15:22	2.9K
	_kubricks_dna.txt	2023-11-03 15:22	13K
	_kubricks_dna_c.txt	2023-11-03 15:22	608
	_kubricks_sp.txt	2023-11-03 15:22	397
	_kubricks_sp_c.txt	2023-11-03 15:22	330
	_kubricks_treesp.txt	2023-11-03 15:22	58
	_kubricks_treesp_c.txt	2023-11-03 15:22	236
	make_all	2023-11-03 15:22	171
	make_check	2023-11-03 15:22	131
	make_data	2023-11-03 15:22	246
	make_gzip	2023-11-03 15:22	241
	make_model_test	2023-11-03 15:22	91
	make_technical_trees	2023-11-03 15:22	195
	make_trees_semistrict	2023-11-03 15:22	249